COUSIN (COdon Usage Similarity INdex)
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Basic calculation step
Pattern Analysis
Optimization Analysis
Simulation Analysis
Clustering Analysis
Create a Codon Usage Table
Compare two datasets
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* Theses parameters are mandatory
Comparison type *
CVC - Codon Usage Table against another One
CVS - Codon Usage Table against a list of sequences
SVC - List of sequences againt a Codon Usage Table
SVS - Liste of sequences against another one
First dataset (CUT or FASTA file) *
Second dataset (CUT or FASTA file) *
Genetic Code *
1 - The Standard Code
2 - The Vertebrate Mitochondrial Code
3 - The Yeast Mitochondrial Code
4 - The Mold, Protozoan, and Coelenterate Mitochondrial Code and the Mycoplasma/Spiroplasma Code
5 - The Invertebrate Mitochondrial Code
6 - The Ciliate, Dasycladacean and Hexamita Nuclear Code
9 - The Echinoderm Mitochondrial Code
10 - The Euplotid Nuclear Code
11 - The Bacterial Code
12 - The Alternative Yeast Nuclear Code
13 - The Ascidian Mitochondrial Code
14 - The Flatworm Mitochondrial Code
15 - Blepharisma Nuclear Code
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